Media 000371064: Vertebral Column
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

In Collections

Project
· Public
Team
· Public

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No tags found.

GENERAL DETAILS Field Definitions

Media ID
000371064
Media type
Mesh
Object element or part
Vertebral column
Object represented
Object taxonomy
Microgale thomasi
Side
Midline
Orientation
--
Short description
--
Full description
--
Creator
Elizabeth Griffiths
Date created
July 22, 2021
Date uploaded
July 22, 2021

FILE OBJECT DETAILS Field Definitions

File name
Microgale_thomasi_UMMZ_172202_vertebrae_all.ply
File format(s)
PLY
File size
271 MB
Points
3516674
Polygons
7029502
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
40.790, 28.931, 86.469
Centroid coordinates
31.277, 21.768, 41.223
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Michigan Museum of Zoology (Copyright and License)
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
University of Michigan, Museum of Zoology, 3600 Varsity Drive, Ann Arbor, Michigan 48108
Cite as
If the Digital Data were produced by the UMMZ, you agree that the attribution, in an acknowledgements section or similar will read: “The data was provided courtesy of the University of Michigan Museum of Zoology.” If the Digital Data represent a voucher specimen held by the UMMZ, the catalog number of the specimen must be referenced in the Specimen Examined or similar section in the manuscript (e.g., ummz:mammals:12345).
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMZ:mammals:172202 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)
Creator
Roger Benson
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.354
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1801
Voltage
115
Power
--
Amperage
260
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000141200: Whole Body [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Roger Benson
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000141200: Whole Body [CTImageSeries] [CT] was processed to create derived Media 000371064: Vertebral Column [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Elizabeth Griffiths
Event date
--
Software
Avizo
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000371064: Vertebral Column [Mesh] [CT] (this media)