Media 000405896: Trematomus Scotti (Tsco 2018 008), Micro Ct (Iodine Stained), Whole Specimen
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000405896: Trematomus Scotti (Tsco 2018 008), Micro Ct (Iodine Stained), Whole Specimen
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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In Collections
Project
ยท Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000405896
Media type
Volumetric Image Series
Object element or part
Trematomus scotti (Tsco_2018_008), microCT (iodine stained), Whole specimen
Object represented
Object taxonomy
Trematomus scotti
Object organization
Side
--
Orientation
Transversal
Short description
microCT scan of full iodine stained specimen of Trematomus scotti (Tsco_2018_008) with X-cell xenomas
Full description
--
Creator
Lauridsen, Henrik
Date created
November 09, 2020
Date uploaded
December 08, 2021
FILE OBJECT DETAILS Field Definitions
File name
Tsco_2018-008_microCT_FullBody_LugolStained.zip
File format(s)
ZIP archive
File size
1.88 GB
Image width
--
Image height
--
Color space
--
Color depth
--
Compression
--
X pixel spacing
0.041000
Y pixel spacing
0.041000
Z pixel spacing
0.041000
Pixel spacing units
--
Slice thickness
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical XtremeCT, Aarhus Department of Clinical Medicine (Aarhus University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
zmuc:p:241299
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical XtremeCT
Device facility
Aarhus Department of Clinical Medicine (Aarhus University)
Creator
Lauridsen, Henrik
Event date
November 09, 2020
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
132
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
1000
Voltage
59.4
Power
--
Amperage
119
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000405896: Trematomus Scotti (Tsco 2018 008), Micro Ct (Iodine Stained), Whole Specimen [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Lauridsen, Henrik
Event date
November 09, 2020
Software
ImageJ
Description
Export of DICOM to TIF stack
Description attachment
None