Media 000100019: Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

In Collections

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000100019
Media type
Volumetric Image Series
Object element or part
body
Object represented
Object taxonomy
Kronoheros umbriferus
Object organization
Side
--
Orientation
--
Short description
zipped jpeg stack
Full description
Migrated MorphoSource 1 Media File Title: zipped jpeg stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives Migrated MorphoSource 1 Media Group Description: Specimen Scan Symbol is H cutout
Creator
--
Date created
--
Date uploaded
January 30, 2020

FILE OBJECT DETAILS Field Definitions

File name
Cas_F_77074_body.zip
File format(s)
ZIP archive, JPEG
File size
203 MB
Image width
1360
Image height
732
Color space
YCbCr
Color depth
8
Compression
JPEG
X pixel spacing
0.035176
Y pixel spacing
0.035176
Z pixel spacing
0.035176
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
3,272

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
Download reviewer
--
IP holder
California Academy of Sciences
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701665; NSF DBI-1701870; NSF DBI-1701714; oVert TCN
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: California Academy of Sciences provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CAS:ICH:77074 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173
Device facility
Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)
Creator
Link Morgan
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
1.17
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
4
Projections
800
Voltage
65
Power
0.007995
Amperage
123
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000100019: Body [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Link Morgan
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000100019: Body [CTImageSeries] [Etc] (this media)