# Last modified: 2024.03.28_08.41.29 # Updates available at: https://n2t.net/ark:/13030/c7xk84q2j # To request a prefix: https://n2t.net/e/prefix_request # # This is a YAML-format registry that enumerates the Compact Identifier # prefixes (id schemes) jointly recognized by the California Digital # Library (CDL) and the European Molecular Biology Laboratory - European # Bioinformatics Institute (EMBL-EBI) and their respective meta-resolvers, # # n2t.net and identifiers.org. # # A prefix consists of a namespace, optionally preceded by a provider code # and a '/' character, for example, "pdb", "pmid", "taxon", and "rcsb/pdb". # # := [ + '/' ] + # # A published compact identifier (compact-id) consists of a prefix, a colon, # and a scheme-local identifier (eg, a database accession number): # # := + ':' + # # A compact-id is made actionable by using it as the path part of a URL # and prepending one of the meta-resolvers for the hostname, for example, # # n2t.net/pmid:1234567 # identifiers.org/pmid:1234567 # # This registry file is a series of YAML blocks, each ending in a blank line. # The elements in a block are defined as follows: # # namespace (required) # A string of lowercase letters and digits defining the identifier # collection, typically for a given database. The combination of # namespace prefix and provider (below) must be unique across the # registry. # # provider (optional) # A string of lowercase letters and digits defining one provider for an # identifier namespace prefix. The combination of namespace prefix and # provider (above) must be unique across the registry. # # alias (optional) # A string of lowercase letters and digits specifying an alternate name for # the namespace. The combination of alias prefix, or namespace prefix, and # provider (below) must be unique across the registry. # # title (required) # A text string containing the full name of the prefix. # # homepage (required) # A URL that leads to a web page with more information about the prefix. If # the page contains schema.org tags, the meta-resolver may exploit them for # descriptive information. # # note (optional, repeatable) # A text string containing arbitrary annotations. # # The contents of this file are dedicated to the public domain under the terms # of CC0 1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/ # and FAIRsharing entry https://fairsharing.org/bsg-s001091. Please visit # https://www.ebi.ac.uk/support/identifiers.org for questions or feedback. - namespace: 3dmet title: 3DMET database homepage: http://www.3dmet.dna.affrc.go.jp/ - namespace: abs title: ABS at IMIM homepage: http://genome.crg.es/datasets/abs2005/ - namespace: aceview.worm provider: ncbi title: AceView Worm at NCBI homepage: https://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/index.html?worm - namespace: addgene title: Addgene Plasmid Repository homepage: http://addgene.org/ - namespace: adw title: Animal Diversity Web at University of Michigan homepage: https://animaldiversity.org/ - namespace: affy.probeset title: Affymetrix ProbeSet in Santa Clara homepage: http://www.affymetrix.com/ - namespace: aftol.taxonomy title: AFTOL at University of Minnesota homepage: http://aftol.org/data.php - namespace: agricola title: AGRICOLA at National Agricultural Library homepage: http://agricola.nal.usda.gov/ - namespace: allergome title: Allergome at Rome homepage: http://www.allergome.org/ - namespace: amoebadb title: AmoebaDB at EuPathDB homepage: http://amoebadb.org/amoeba/ - namespace: antibodyregistry title: Antibody Registry at University of California homepage: http://antibodyregistry.org/ - namespace: antweb title: AntWeb at California Academy of Sciences homepage: http://www.antweb.org/ - namespace: aop title: AOPWiki homepage: https://aopwiki.org/ - namespace: aop.events title: AOPWiki (Key Event) homepage: https://aopwiki.org/ - namespace: aop.relationships title: AOPWiki (Key Event Relationship) homepage: https://aopwiki.org/ - namespace: aop.stressor title: AOPWiki (Stressor) homepage: https://aopwiki.org/ - namespace: apd title: APD at Nebraska homepage: http://aps.unmc.edu/AP/ - namespace: aphidbase.transcript title: AphidBase at INRA homepage: http://www.aphidbase.com/aphidbase - namespace: apid.interactions title: APID at Salamanca homepage: http://cicblade.dep.usal.es:8080/APID/ - namespace: arachnoserver title: ArachnoServer at Brisbane homepage: http://www.arachnoserver.org/ - namespace: ardb title: ARDB at University of Maryland homepage: http://ardb.cbcb.umd.edu/ - namespace: ark title: ARK via the Name-to-Thing resolver. homepage: http://n2t.net/ - namespace: arrayexpress provider: ebi title: ArrayExpress homepage: https://www.ebi.ac.uk/arrayexpress/ - namespace: arrayexpress provider: omicsdi title: ArrayExpress through OmicsDI homepage: https://www.omicsdi.org/ - namespace: arrayexpress.platform provider: ebi title: ArrayExpress Platform at EBI homepage: https://www.ebi.ac.uk/arrayexpress/ - namespace: arraymap title: ArrayMap homepage: https://www.arraymap.org - namespace: arxiv title: Cornell University arXiv homepage: https://arxiv.org/ - namespace: asap title: ASAP at University of Wisconsin homepage: http://asap.ahabs.wisc.edu/asap/home.php - namespace: ascl title: Astrophysics Source Code Library homepage: http://ascl.net/ - namespace: asin title: Amazon Standard Identification Number (ASIN) homepage: https://www.amazon.co.uk/gp/help/customer/display.html/277-3416785-8259466?ie=UTF8&nodeId=898182 - namespace: aspgd.locus title: AspGD at Stanford Medical School homepage: http://www.aspgd.org/ - namespace: aspgd.protein title: AspGD Protein at Stanford Medical School homepage: http://www.aspgd.org/ - namespace: atc title: Anatomical Therapeutic Chemical Index at WHO homepage: http://www.whocc.no/atc_ddd_index/ - namespace: atcc title: ATCC in Virginia homepage: http://www.atcc.org/ - namespace: atcvet title: Anatomical Therapeutic Chemical Vet Index at WHO homepage: http://www.whocc.no/atcvet/atcvet_index/ - namespace: atfdb.family title: Animal TFDB at Hubei Bioinformatics & Molecular Imaging Key Laboratory homepage: http://www.bioguo.org/AnimalTFDB/family_index.php - namespace: autdb title: AutDB at MindSpec homepage: http://autism.mindspec.org/autdb/ - namespace: bacdive title: Bacterial Diversity Metadatabase homepage: https://bacdive.dsmz.de/ - namespace: bacmap.biog title: BacMap Biography at University of Alberta homepage: http://bacmap.wishartlab.com/ - namespace: bacmap.map title: BacMap Genome Map at University of Alberta homepage: http://bacmap.wishartlab.com/ - namespace: bao provider: bptl title: BioAssay Ontology through BioPortal homepage: http://bioportal.bioontology.org/ontologies/BAO/ - namespace: bao provider: ols title: BioAssay Ontology through OLS homepage: https://bioportal.bioontology.org/ontologies/BAO/ - namespace: bdgp.est provider: ncbi title: BDGP EST at NCBI homepage: https://www.ncbi.nlm.nih.gov/dbEST/index.html - namespace: bdgp.insertion title: BDGP Gene Disruption Project homepage: http://flypush.imgen.bcm.tmc.edu/pscreen/ - namespace: bdsc title: BDSC at Indiana University homepage: https://bdsc.indiana.edu/about/mission.html - namespace: beetlebase title: BeetleBase at Kansas State University homepage: http://beetlebase.org/ - namespace: begdb title: Benchmark Energy & Geometry Database homepage: http://www.begdb.com - namespace: bgee.family title: Bgee at Lausanne homepage: http://bgee.unil.ch/bgee/bgee - namespace: bgee.gene title: Bgee gene homepage: https://bgee.org/ - namespace: bgee.organ title: Bgee at Lausanne homepage: http://bgee.unil.ch/bgee/bgee - namespace: bgee.stage title: Bgee at Lausanne homepage: http://bgee.unil.ch/bgee/bgee - namespace: bigg.compartment title: BiGG Compartment at University of California homepage: http://bigg.ucsd.edu/compartments/ - namespace: bigg.metabolite title: BiGG Metabolite at University of Cakifornia homepage: http://bigg.ucsd.edu/universal/metabolites - namespace: bigg.model title: BiGG Model at University of California homepage: http://bigg.ucsd.edu/models - namespace: bigg.reaction title: BiGG Reaction at University of California homepage: http://bigg.ucsd.edu/universal/reactions - namespace: bindingdb title: BindingDB homepage: https://www.bindingdb.org - namespace: biocarta.pathway title: BioCarta Pathway at NCI homepage: https://www.biocarta.com/ - namespace: biocatalogue.service provider: ebi title: BioCatalogue at EMBL-EBI homepage: https://www.biocatalogue.org/ - namespace: biocyc title: BioCyc at SRI International homepage: http://biocyc.org - namespace: biogrid title: BioGRID database of physical and genetic interactions homepage: http://thebiogrid.org/ - namespace: biomaps title: main webpage homepage: http://www.mmmp.org/MMMP/public/biomap/listBiomap.mmmp - namespace: biominder title: Bio-MINDER Tissue Database homepage: https://datalab.rwth-aachen.de/MINDER - namespace: biomodels.db provider: ebi title: BioModels Database homepage: https://www.ebi.ac.uk/biomodels/ - namespace: biomodels.db provider: omicsdi title: BioModels through OmicsDI homepage: https://www.omicsdi.org/ - namespace: biomodels.kisao provider: bptl title: KiSAO via NCBO's Bioportal homepage: http://bioportal.bioontology.org/ontologies/KISAO - namespace: biomodels.kisao provider: ols title: KiSAO through OLS homepage: https://www.ebi.ac.uk/ols/ontologies/kisao - namespace: biomodels.teddy provider: bptl title: TEDDY through BioPortal homepage: http://teddyontology.sourceforge.net/ - namespace: biomodels.teddy provider: ols title: TEDDY though OLS homepage: https://www.ebi.ac.uk/ols/ontologies/teddy - namespace: biomodels.vocabulary title: Vocabulary via BioModels.net homepage: http://biomodels.net/rdf/vocabulary.rdf - namespace: bionumbers title: BioNumbers database homepage: https://bionumbers.hms.harvard.edu - namespace: bioportal provider: bptl title: BioPortal at National Center for Biomedical Ontology homepage: http://bioportal.bioontology.org/ - namespace: bioproject provider: ncbi title: BioProject at NCBI homepage: https://www.ncbi.nlm.nih.gov/bioproject - namespace: bioproject provider: ebi title: BioProject at European Nucleotide Archive (ENA) homepage: https://www.ebi.ac.uk/ena/ - namespace: biosample provider: ebi title: BioSamples Database at EBI homepage: https://www.ebi.ac.uk/biosamples/ - namespace: biosample provider: ncbi title: BioSample at NCBI homepage: http://www.ncbi.nlm.nih.gov/biosample - namespace: biostudies provider: ebi title: BioStudies database homepage: https://www.ebi.ac.uk/biostudies/ - namespace: biosystems provider: ncbi title: BioSystems database at NCBI homepage: https://www.ncbi.nlm.nih.gov/biosystems/ - namespace: biotools title: BioTools homepage: https://bio.tools/ - namespace: bitterdb.cpd title: BitterDB Compound at The Hebrew University of Jerusalem homepage: http://bitterdb.agri.huji.ac.il/dbbitter.php - namespace: bitterdb.rec title: BitterDB Receptor at The Hebrew University of Jerusalem homepage: http://bitterdb.agri.huji.ac.il/dbbitter.php - namespace: bold.taxonomy title: BOLD taxonomy browser homepage: http://www.boldsystems.org/ - namespace: brenda title: Brenda enzyme database homepage: https://www.brenda-enzymes.org/ - namespace: broad title: Broad Fungal Genome Initiative at Broad Institute homepage: https://www.broadinstitute.org/annotation/genome/magnaporthe_grisea/ - namespace: bto provider: bptl title: Brenda Tissue Ontology through BioPortal homepage: http://bioportal.bioontology.org/ontologies/BTO - namespace: bto provider: ols title: Brenda Tissue Ontology through OLS homepage: https://www.ebi.ac.uk/ols/ontologies/bto - namespace: bugbase.expt title: BugBase Expt at University of London homepage: http://bugs.sgul.ac.uk/E-BUGS - namespace: bugbase.protocol title: BugBase Protocol at University of London homepage: http://bugs.sgul.ac.uk/E-BUGS - namespace: bykdb title: BYKdb at CNRS homepage: https://bykdb.ibcp.fr/BYKdb/ - namespace: cabri title: CABRI Cell Lines catalogue in Genova (SRS) homepage: http://www.cabri.org/ - namespace: cadsr title: Cancer Data Standards Registry and Repository homepage: https://wiki.nci.nih.gov/display/caDSR/caDSR+Wiki - namespace: cameo title: CAMEO homepage: https://cameo3d.org - namespace: caps title: CAPS-DB at Leeds Institute of Molecular Medicine homepage: http://www.bioinsilico.org/cgi-bin/CAPSDB/staticHTML/home - namespace: cas title: CAS through Common Chemistry homepage: http://commonchemistry.org - namespace: cath title: CATH Node through UCL homepage: http://www.cathdb.info - namespace: cath.domain title: CATH domain at UCL homepage: http://www.cathdb.info/ - namespace: cath.superfamily title: CATH superfamily at UCL homepage: http://www.cathdb.info/ - namespace: cattleqtldb title: Animal QTL Cattle at Iowa State University homepage: http://www.animalgenome.org/cgi-bin/QTLdb/BT/index - namespace: cazy title: CAZy at CNRS homepage: http://www.cazy.org/ - namespace: cbioportal title: The cBioPortal for Cancer Genomics homepage: http://www.cbioportal.org - namespace: ccds provider: ncbi title: Consensus CDS at NCBI homepage: http://www.ncbi.nlm.nih.gov/CCDS/ - namespace: cco provider: ols title: Cell Cycle Ontology through OLS homepage: https://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=CCO - namespace: cdd provider: ncbi title: Conserved Domain Database at NCBI homepage: https://www.ncbi.nlm.nih.gov/sites/entrez?db=cdd - namespace: cdpd title: Canadian Drug Identification Number at Health Canada homepage: http://webprod3.hc-sc.gc.ca/dpd-bdpp/index-eng.jsp - namespace: cellimage title: Cell Image Library at American Society for Cell Biology homepage: http://cellimagelibrary.org/ - namespace: cellosaurus provider: sib title: Cellosaurus through SIB homepage: https://web.expasy.org/cellosaurus/ - namespace: cgd title: Candida Genome Database at Stanford University homepage: http://www.candidagenome.org/ - namespace: cgsc title: CGSC at Yale university homepage: http://cgsc.biology.yale.edu/index.php - namespace: charprot title: CharProt at JCVI homepage: http://www.jcvi.org/charprotdb - namespace: chebi provider: ebi title: ChEBI (Chemical Entities of Biological Interest) homepage: https://www.ebi.ac.uk/chebi/ - namespace: chebi provider: bptl title: ChEBI through BioPortal homepage: http://bioportal.bioontology.org/ontologies/CHEBI - namespace: chebi provider: ols title: ChEBI through OLS homepage: https://www.ebi.ac.uk/ols/ontologies/chebi - namespace: chembl.compound provider: ebi title: ChEMBL compound database at EBI homepage: https://www.ebi.ac.uk/chembldb/ - namespace: chembl.target provider: ebi title: ChEMBL targets database at EBI homepage: https://www.ebi.ac.uk/chembldb/ - namespace: chemdb title: ChemDB at UC Irvine homepage: http://cdb.ics.uci.edu/ - namespace: chemidplus title: ChemIDplus at National Library of Medicine homepage: https://chem.nlm.nih.gov/chemidplus/chemidheavy.jsp - namespace: chemspider title: ChemSpider at RSC homepage: http://www.chemspider.com/ - namespace: chickenqtldb title: Animal QTL Chicken at Iowa State University homepage: http://www.animalgenome.org/cgi-bin/QTLdb/GG/index - namespace: cl provider: bptl title: Cell Type Ontology through BioPortal homepage: http://bioportal.bioontology.org/ontologies/CL - namespace: cl provider: ols title: Cell Type Ontology through OLS homepage: https://www.ebi.ac.uk/ols/ontologies/cl - namespace: cldb title: CLDB at Genova homepage: http://bioinformatics.hsanmartino.it/hypercldb/indexes.html - namespace: clinicaltrials title: ClinicalTrials.gov at NIH homepage: https://clinicaltrials.gov/ - namespace: clinvar provider: ncbi title: ClinVar Variant at NCBI homepage: http://www.ncbi.nlm.nih.gov/clinvar/ - namespace: clinvar.record provider: ncbi title: ClinVar Record at NCBI homepage: http://www.ncbi.nlm.nih.gov/clinvar/ - namespace: clinvar.submission provider: ncbi title: ClinVar Submission at NCBI homepage: http://www.ncbi.nlm.nih.gov/clinvar/ - namespace: combine.specifications provider: ebi title: COMBINE at EBI homepage: https://co.mbine.org/standards/ - namespace: complexportal title: Complex Portal homepage: https://www.ebi.ac.uk/complexportal - namespace: comptox title: CompTox Chemistry Dashboard homepage: https://comptox.epa.gov/dashboard - namespace: compulyeast title: Compluyeast database at Universidad Complutense Madrid homepage: http://compluyeast2dpage.dacya.ucm.es/ - namespace: conoserver title: ConoServer at University of Queensland homepage: http://www.conoserver.org/ - namespace: coriell title: Coriell Cell Repositories at Coriell Institute homepage: http://ccr.coriell.org/ - namespace: corum title: CORUM at Institute for Bioinformatics and Systems Biology (Germany) homepage: https://mips.helmholtz-muenchen.de/genre/proj/corum/ - namespace: cosmic title: COSMIC Gene at Sanger homepage: http://cancer.sanger.ac.uk/cosmic/ - namespace: cpc title: Cooperative Patent Classification at Espace homepage: https://worldwide.espacenet.com/classification - namespace: crisprdb title: CRISPRdb homepage: http://crispr.i2bc.paris-saclay.fr/ - namespace: cryptodb title: CryptoDB at EuPathDB homepage: https://cryptodb.org/cryptodb/ - namespace: csa provider: ebi title: CSA at EBI homepage: https://www.ebi.ac.uk/thornton-srv/databases/CSA/ - namespace: cst title: CST Pathways at Cell Signaling Technology homepage: http://www.cellsignal.com/pathways/index.html - namespace: cst.ab title: CST Antibody at Cell Signaling Technology homepage: http://www.cellsignal.com/catalog/index.html - namespace: ctd.chemical title: Comparative Toxicogenomics Database (Chemical) homepage: http://ctdbase.org/ - namespace: ctd.disease title: Comparative Toxicogenomics Database (Disease) homepage: http://ctdbase.org/ - namespace: ctd.gene title: Comparative Toxicogenomics Database (Gene) homepage: http://ctdbase.org/ - namespace: cubedb title: Cube db at Bioinformatics Institute (Singapore) homepage: http://epsf.bmad.bii.a-star.edu.sg/cube/db/html/home.html - namespace: d1id title: DataONE homepage: https://www.dataone.org - namespace: dailymed title: DailyMed at NLM homepage: https://dailymed.nlm.nih.gov/dailymed/ - namespace: darc title: DARC at University of Munich homepage: http://darcsite.genzentrum.lmu.de/darc/index.php - namespace: dashr title: DASHR at University of Pennsylvania homepage: http://lisanwanglab.org/DASHR/ - namespace: dashr.expression title: DASHR expression at University of Pennsylvania homepage: https://dashr1.lisanwanglab.org/show-expression-table.php?start=0 - namespace: datf title: DATF through PlantTFDB homepage: http://datf.cbi.pku.edu.cn/ - namespace: dbd title: DBD at MRC Laboratory of Molecular Biology homepage: http://www.transcriptionfactor.org/ - namespace: dbest provider: ncbi title: dbEST at NCBI homepage: https://www.ncbi.nlm.nih.gov/nucest - namespace: dbest provider: ebi title: dbEST through European Nucleotide Archive (ENA) homepage: https://www.ebi.ac.uk/ena - namespace: dbg2introns title: Bacterial Group II Introns at University of Calgary homepage: http://webapps2.ucalgary.ca/~groupii/ - namespace: dbgap provider: ncbi title: dbGaP through NCBI homepage: https://www.ncbi.nlm.nih.gov/projects/gap - namespace: dbprobe provider: ncbi title: dbProbe at NCBI homepage: https://www.ncbi.nlm.nih.gov/sites/entrez?db=probe - namespace: dbsnp provider: ncbi title: dbSNP at NCBI homepage: https://www.ncbi.nlm.nih.gov/snp/ - namespace: dbsnp provider: sib title: SNP2TFBS homepage: https://ccg.epfl.ch/snp2tfbs/ - namespace: degradome title: Degradome Database at homepage: http://degradome.uniovi.es/ - namespace: depod title: DEPOD at EMBL homepage: http://www.depod.bioss.uni-freiburg.de - namespace: dev.ga4ghdos title: Data Object Service homepage: http://github.com/ga4gh/data-object-service-schemas - namespace: dictybase.est title: Dictybase Gene at Northwestern University homepage: http://dictybase.org/ - namespace: dictybase.gene title: Dictybase Gene at Northwestern University homepage: http://dictybase.org/ - namespace: did title: Decentralized Identifiers (DIDs) homepage: https://w3c-ccg.github.io/did-spec/ - 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