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hsa-mir-200a

RNAhsa-mir-200a
Genomic coordinateschr1:1103243-1103332 (+) (GRCh37)
Length90
SequenceShow sequence

Download as FASTA

RNA structureShow structure plot
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Expression information
1115724 reads
24634 reads per million
41 tissues
average 600 reads per million per tissue
Genome browser viewView in the genome browser



Expression profile across tissues

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Download expression profile (CSV)

Read coverage profile across tissues



Expression profile per tissue

Select dataset from the expression table below to display tissue-specific sncRNA information:


TissueRead countRPM
wholeislet18271.04 2041.73
wholeblood12 0.01
testiculargerm1905.833 8.43
spleen15204.68 320.56
spermatozoa111.0476 1.87
skin2114931 3650.45
skin188151.2 483.08
serum238.5238 3.64
serum168.381 9.06
plasma116.3333 0.77
peripheralbmc263.7976 6.65
peripheralbmc14 1.16
pancreaticislet1151109 1674.27
pancreaticbetacell164343.3 896.89
pancreas1682.533 411.41
muscle16 0.91
monocytemacrophage153 5.97
lung2721.667 164.02
lung131309.2 249.82
liver31689.25 52.50
liver247 17.48
liver1273 31.68
kidney228635.1 365.33
kidney14100.81 514.04
heart23 0.68
heart114 0.76
colonrectum155695.6 2551.99
coloncoecum1103201 3738.96
colonascendens1100456 3206.19
colon223766.7 448.80
colon1319171 3248.60
cd4plustcell116.0333 0.86
breast12354.45 154.18
braintgm114.0476 1.75
brainpfc2154.893 5.36
brainpfc1229 5.39
brainog113 5.02
bladder19941.59 339.12
bcellplasma16 2.14
bcellnaive118 6.27
bcellmemory110 3.70
bcellgerminalcenter18 2.32
adipose114.0952 0.20
Download expression table (CSV)


Expression: hsa-mir-200a | testiculargerm1

Read count: 905.833

5p entropy: 0.28481(max=2.32193)

3p entropy: 1.62152(max=3)

Read coverage: hsa-mir-200a | testiculargerm1

Show raw read coverage data (bedgraph) Show raw plot data

RNA structure (SAVoR) | testiculargerm1