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ASM15549v1

Organism name:: Helicobacter pullorum MIT 98-5489 (e-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: MIT 98-5489
BioSample:: SAMN02463681
BioProject:: PRJNA30075
Submitter:: Broad Institute
Date:: 2008/08/28
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000155495.1 (latest)
RefSeq assembly accession:: GCF_000155495.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: ABQU01

IDs: 181918 [UID] 181898 [GenBank] 181918 [RefSeq]

See Genome Information for Helicobacter pullorum

Pathogen Detection Resources

There are 35 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000155495.1	=	GCF_000155495.1	ASM15549v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

This is a reference genome for the Human Microbiome Project.
This project is co-owned with the Human Microbiome Project DACC.
Genome Coverage: 60X
Sequencing Technology: 454
Annotation was added to the scaffolds in June 2009
Product names were updated in June 2013

Global statistics

Total sequence length	1,951,667
Total ungapped length	1,919,070
Gaps between scaffolds	0
Number of scaffolds	44
Scaffold N50	277,479
Scaffold L50	3
Number of contigs	131
Contig N50	42,907
Contig L50	16
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	131

	ANI	Query coverage	Subject coverage
Declared type	98.18	79.11	88.90
Best-match type	98.18	79.11	88.90

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ASM15549v1

See Genome Information for Helicobacter pullorum

Pathogen Detection Resources

There are 35 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly for declared species

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Average Nucleotide Identity (ANI) data

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