bptl/ms: for: ms type: synonym ms: alias: description: The PSI-Mass Spectrometry (MS) CV contains all the terms used in the PSI MS-related data standards. The CV contains a logical hierarchical structure to ensure ease of maintenance and the development of software that makes use of complex semantics. The CV contains terms required for a complete description of an MS analysis pipeline used in proteomics, including sample labeling, digestion enzymes, instrumentation parts and parameters, software used for identification and quantification of peptides/proteins and the parameters and scores used to determine their significance. forward: http://purl.bioontology.org/ontology/MS/MS:${ac} institution: National Center for Biomedical Ontology, Stanford location: USA more: https://bioportal.bioontology.org/ontologies/MS name: Mass Spectrometry Controlled Vocabulary through BioPortal pattern: ^MS:\d{7}$ prefixed: true primary: false probe: http://purl.bioontology.org/ontology/MS/MS:1000001 provider: bptl provider_id: MIR:00100787 redirect: http://purl.bioontology.org/ontology/MS/MS:$id sort_score: 4 state: 0:Unknown subject: mass spectrometry; controlled vocabulary synonym: Agricultural Online Access test: 1000001 type: scheme ols/ms: alias: description: The PSI-Mass Spectrometry (MS) CV contains all the terms used in the PSI MS-related data standards. The CV contains a logical hierarchical structure to ensure ease of maintenance and the development of software that makes use of complex semantics. The CV contains terms required for a complete description of an MS analysis pipeline used in proteomics, including sample labeling, digestion enzymes, instrumentation parts and parameters, software used for identification and quantification of peptides/proteins and the parameters and scores used to determine their significance. forward: https://www.ebi.ac.uk/ols/ontologies/ms/terms?obo_id=MS:${ac} institution: European Bioinformatics Institute, Hinxton, Cambridge location: UK more: https://www.ebi.ac.uk/ols/ontologies/ms name: Mass Spectrometry Controlled Vocabulary through OLS pattern: ^MS:\d{7}$ prefixed: true primary: false probe: https://www.ebi.ac.uk/ols/ontologies/ms/terms?obo_id=MS:1000001 provider: ols provider_id: MIR:00100786 redirect: https://www.ebi.ac.uk/ols/ontologies/ms/terms?obo_id=MS:$id sort_score: 2 state: 100:Up subject: mass spectrometry; controlled vocabulary synonym: Agricultural Online Access test: 1000001 type: scheme