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Sequence Types and Features Ontology
Last uploaded:
November 18, 2024
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| Id | http://purl.obolibrary.org/obo/SO_0001157
http://purl.obolibrary.org/obo/SO_0001157
|
|---|---|
| Preferred Name | DMv4_motif |
| Definitions |
A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).
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| Synonyms |
YGGTCACATR
promoter motif 1
directional motif v4
motif 1 element
DMv4
DMv4 motif
|
| Type | http://www.w3.org/2002/07/owl#Class |
All Properties
| definition | A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014). |
|---|---|
| label | DMv4_motif
|
| prefLabel | DMv4_motif
|
| notation | SO:0001157
|
| has_narrow_synonym | YGGTCACATR
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| id | SO:0001157
|
| has_obo_namespace | sequence
|
| subClassOf | |
| type | |
| has_exact_synonym |
promoter motif 1
directional motif v4
motif 1 element
DMv4
DMv4 motif
|
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